Gent evolutionary algorithms for substantial parameter optimization challenges. IEEE Transactions on Evolutionary Computation 2004, eight(6):522-541. 20. Kawashima S, Ogata H, Kanehisa M: AAindex: Amino acid index database. Nucleic Acids Res 2000, 28(1):374-374. 21. Huang H-L, Li M-C, Vasylenko T, Ho S-Y: Computational prediction and analysis of human transporters working with physicochemical properties of amino acids. International Journal of Engineering and Technical Analysis two(2):180-187. 22. Kim MS, Yi GS: HMPAS: Human membrane Bentiromide medchemexpress protein Analysis Program. Proteome Sci 2013, 11(Suppl 1):S7. 23. Vasylenko T, Liou YF, Chen HA, Charoenkwan P, Huang HL, Ho SY: SCMPSP: Prediction and characterization of photosynthetic proteins determined by a scoring card approach. BMC Bioinformatics 2015, 16(Suppl 1):S8. 24. Bradley AP: The usage of the location under the roc curve inside the evaluation of machine understanding algorithms. Pattern Recogn 1997, 30(7):1145-1159. 25. Huang HL, Lin IC, Liou YF, Tsai CT, Hsu KT, Huang WL, et al: Predicting and analyzing DNA-binding domains making use of a systematic method to identifying a set of informative physicochemical and biochemical properties. BMC Bioinformatics 2011, 12 Suppl 1:S47. 26. Chang CC, Lin CJ: LIBSVM: A Library for Assistance Vector Machines. ACM Transactions on Intelligent Systems and Technologies 2011, 2(3). 27. Frank E, Hall M, Trigg L, Holmes G, Witten IH: Data mining in bioinformatics working with Weka. Bioinformatics 2004, 20(15):2479-2481. 28. DeLano WL, Lam JW: PyMOL: A communications tool for computational models. Abstr Pap Am Chem S 2005, 230:U1371-U1372. 29. Saier MH, Tran CV, Barabote RD: TCDB: the Transporter Classification Database for membrane transport protein analyses and details. Nucleic Acids Res 2006, 34(Database issue):D181-D186. 30. Alpha 1 proteinase Inhibitors products Watanabe Y, Feick RG, Shiozawa JA: Cloning and Sequencing in the Genes Encoding the Light-Harvesting B806-866 Polypeptides and Initial Studies on the Transcriptional Organization of Puf2b, Puf2a and Puf2c in Chloroflexus-Aurantiacus. Arch Microbiol 1995, 163(2):124-130. 31. Kaneko T, Sato S, Kotani H, Tanaka A, Asamizu E, Nakamura Y, et al: Sequence evaluation in the genome of your unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination on the whole genome and assignment of possible protein-coding regions. DNA Res 1996, three(three):185-209. 32. Corbalan N, Runti G, Adler C, Covaceuszach S, Ford RC, Lamba D, et al: Functional and structural study in the dimeric inner membrane protein SbmA. J Bacteriol 2013, 195(23):5352-5361. 33. Kyte J, Doolittle RF: A basic process for displaying the hydropathic character of a protein. J Mol Biol 1982, 157(1):105-132. 34. Santoni V, Molloy M, Rabilloud T: Membrane proteins and proteomics: un amour not possible Electrophoresis 2000, 21(six):1054-1070. 35. Sciara G, Mancia F: Highlights from recently determined structures of membrane proteins: a focus on channels and transporters. Curr Opin Struct Biol 2012, 22(four):476-481. 36. Grisshammer RK, Buchanan SK: Structural biology of membrane proteins. Royal Society of Chemistry 2006, four. 37. Eisenberg D: Three-dimensional structure of membrane and surface proteins. Annual Evaluation of Biochemistry 1984, 53(1):595-623.Liou et al. BMC Genomics 2015, 16(Suppl 12):S6 http:www.biomedcentral.com1471-216416S12SPage 14 of38. Wertz DH, Scheraga HA: Influence of water on protein structure. An analysis of the preferences of amino acid residues for the inside or outside and for specific conformations in a protein mo.
